[Boost-users] Cufflinks building with problems in boost

Subject: [Boost-users] Cufflinks building with problems in boost
From: aquleaf (gingerplum_at_[hidden])
Date: 2011-07-28 13:26:06

I'm trying to install Cufflinks but I failed. It read:
make  all-recursive
make[1]: Entering directory `/usr/local/src/cufflinks-1.0.3'
Making all in src
make[2]: Entering directory `/usr/local/src/cufflinks-1.0.3/src'
g++  -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -march=i686 -O3 
-DNDEBUG  -pthread -I/usr/local/boost/include
-I/usr/local/samtools-0.1.17/include   -o cufflinks -L/usr/local/boost/lib
-L/usr/local/samtools-0.1.17/lib  cufflinks.o libcufflinks.a libgc.a
-lboost_thread -lbam  -lz 
/usr/local/boost/lib/libboost_thread.a(thread.o): In function
`_ZN5boost2CV23simple_exception_policyItLt1ELt31ENS_9gregorian16bad_day_of_monthEE8on_errorEttNS0_14violation_enumE.clone.79':
thread.cpp:(.text+0x5d3): undefined reference to `__sync_fetch_and_add_4'
/usr/local/boost/lib/libboost_thread.a(thread.o): In function
`_ZN5boost2CV23simple_exception_policyItLt1400ELt10000ENS_9gregorian8bad_yearEE8on_errorEttNS0_14violation_enumE.clone.96':
thread.cpp:(.text+0x107b): undefined reference to `__sync_fetch_and_add_4'
/usr/local/boost/lib/libboost_thread.a(thread.o): In function
`_ZN5boost2CV23simple_exception_policyItLt1ELt12ENS_9gregorian9bad_monthEE8on_errorEttNS0_14violation_enumE.clone.97':
thread.cpp:(.text+0x13df): undefined reference to `__sync_fetch_and_add_4'
/usr/local/boost/lib/libboost_thread.a(thread.o): In function
`_ZN5boost9date_time14microsec_clockINS_10posix_time5ptimeEE11create_timeEPFP2tmPKlS6_E.clone.111':
thread.cpp:(.text+0x1e3d): undefined reference to `__sync_fetch_and_add_4'
collect2: ld returned 1 exit status
make[2]: *** [cufflinks] Error 1
make[2]:Leaving directory `/usr/local/src/cufflinks-1.0.3/src'
make[1]: *** [all-recursive] Error 1
make[1]:Leaving directory `/usr/local/src/cufflinks-1.0.3'
make: *** [all] Error 2

I guess there may be some problems with boost. What should I do?

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